Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EHI70330.1 | EHI70341.1 | STRIC_0335 | STRIC_0332 | Bacteriocin biosynthesis cyclodehydratase, SagC family; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | CAAX amino terminal protease family protein. | 0.652 |
| EHI70330.1 | EHI70360.1 | STRIC_0335 | STRIC_0331 | Bacteriocin biosynthesis cyclodehydratase, SagC family; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Hypothetical protein. | 0.454 |
| EHI70330.1 | EHI70379.1 | STRIC_0335 | STRIC_0334 | Bacteriocin biosynthesis cyclodehydratase, SagC family; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Bacteriocin biosynthesis cyclodehydratase, SagC domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.588 |
| EHI70330.1 | EHI70408.1 | STRIC_0335 | STRIC_0329 | Bacteriocin biosynthesis cyclodehydratase, SagC family; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | ABC-2 type transporter. | 0.431 |
| EHI70330.1 | EHI70410.1 | STRIC_0335 | STRIC_0336 | Bacteriocin biosynthesis cyclodehydratase, SagC family; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Integrase core domain protein. | 0.547 |
| EHI70330.1 | EHI70438.1 | STRIC_0335 | STRIC_0328 | Bacteriocin biosynthesis cyclodehydratase, SagC family; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | ABC-2 type transporter. | 0.445 |
| EHI70330.1 | sagD | STRIC_0335 | STRIC_0333 | Bacteriocin biosynthesis cyclodehydratase, SagC family; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Streptolysin-associated protein SagD. | 0.656 |
| EHI70330.1 | sagG | STRIC_0335 | STRIC_0330 | Bacteriocin biosynthesis cyclodehydratase, SagC family; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | ABC transporter, ATP-binding protein SagG. | 0.450 |
| EHI70341.1 | EHI70330.1 | STRIC_0332 | STRIC_0335 | CAAX amino terminal protease family protein. | Bacteriocin biosynthesis cyclodehydratase, SagC family; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.652 |
| EHI70341.1 | EHI70360.1 | STRIC_0332 | STRIC_0331 | CAAX amino terminal protease family protein. | Hypothetical protein. | 0.585 |
| EHI70341.1 | EHI70379.1 | STRIC_0332 | STRIC_0334 | CAAX amino terminal protease family protein. | Bacteriocin biosynthesis cyclodehydratase, SagC domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.803 |
| EHI70341.1 | EHI70408.1 | STRIC_0332 | STRIC_0329 | CAAX amino terminal protease family protein. | ABC-2 type transporter. | 0.731 |
| EHI70341.1 | EHI70410.1 | STRIC_0332 | STRIC_0336 | CAAX amino terminal protease family protein. | Integrase core domain protein. | 0.422 |
| EHI70341.1 | EHI70438.1 | STRIC_0332 | STRIC_0328 | CAAX amino terminal protease family protein. | ABC-2 type transporter. | 0.759 |
| EHI70341.1 | sagD | STRIC_0332 | STRIC_0333 | CAAX amino terminal protease family protein. | Streptolysin-associated protein SagD. | 0.934 |
| EHI70341.1 | sagG | STRIC_0332 | STRIC_0330 | CAAX amino terminal protease family protein. | ABC transporter, ATP-binding protein SagG. | 0.666 |
| EHI70360.1 | EHI70330.1 | STRIC_0331 | STRIC_0335 | Hypothetical protein. | Bacteriocin biosynthesis cyclodehydratase, SagC family; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.454 |
| EHI70360.1 | EHI70341.1 | STRIC_0331 | STRIC_0332 | Hypothetical protein. | CAAX amino terminal protease family protein. | 0.585 |
| EHI70360.1 | EHI70379.1 | STRIC_0331 | STRIC_0334 | Hypothetical protein. | Bacteriocin biosynthesis cyclodehydratase, SagC domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.534 |
| EHI70360.1 | EHI70408.1 | STRIC_0331 | STRIC_0329 | Hypothetical protein. | ABC-2 type transporter. | 0.766 |
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