Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EHI68808.1 | EHI69364.1 | STRIC_1975 | STRIC_1025 | Putative sensor protein LytS; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Transcriptional regulator, AraC family; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.488 |
| EHI68808.1 | EHI69453.1 | STRIC_1975 | STRIC_1024 | Putative sensor protein LytS; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Response regulator receiver domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.488 |
| EHI68808.1 | EHI70364.1 | STRIC_1975 | STRIC_0345 | Putative sensor protein LytS; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Histidine kinase. | 0.798 |
| EHI68808.1 | EHI70414.1 | STRIC_1975 | STRIC_0295 | Putative sensor protein LytS; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Response regulator receiver domain protein. | 0.488 |
| EHI68808.1 | EHI70443.1 | STRIC_1975 | STRIC_0344 | Putative sensor protein LytS; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Hypothetical protein; Identified by glimmer; putative. | 0.488 |
| EHI68808.1 | lytT | STRIC_1975 | STRIC_1977 | Putative sensor protein LytS; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Sensory transduction protein LytT. | 0.986 |
| EHI69364.1 | EHI68808.1 | STRIC_1025 | STRIC_1975 | Transcriptional regulator, AraC family; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Putative sensor protein LytS; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.488 |
| EHI69364.1 | EHI69453.1 | STRIC_1025 | STRIC_1024 | Transcriptional regulator, AraC family; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Response regulator receiver domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.937 |
| EHI69364.1 | EHI69576.1 | STRIC_1025 | STRIC_1026 | Transcriptional regulator, AraC family; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | ABC transporter, solute-binding protein. | 0.849 |
| EHI69364.1 | EHI70364.1 | STRIC_1025 | STRIC_0345 | Transcriptional regulator, AraC family; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Histidine kinase. | 0.706 |
| EHI69364.1 | EHI70414.1 | STRIC_1025 | STRIC_0295 | Transcriptional regulator, AraC family; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Response regulator receiver domain protein. | 0.557 |
| EHI69453.1 | EHI68808.1 | STRIC_1024 | STRIC_1975 | Response regulator receiver domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Putative sensor protein LytS; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.488 |
| EHI69453.1 | EHI69364.1 | STRIC_1024 | STRIC_1025 | Response regulator receiver domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Transcriptional regulator, AraC family; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.937 |
| EHI69453.1 | EHI69576.1 | STRIC_1024 | STRIC_1026 | Response regulator receiver domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | ABC transporter, solute-binding protein. | 0.835 |
| EHI69453.1 | EHI70345.1 | STRIC_1024 | STRIC_0347 | Response regulator receiver domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Putative lipoprotein. | 0.558 |
| EHI69453.1 | EHI70356.1 | STRIC_1024 | STRIC_0346 | Response regulator receiver domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Hypothetical protein. | 0.560 |
| EHI69453.1 | EHI70364.1 | STRIC_1024 | STRIC_0345 | Response regulator receiver domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Histidine kinase. | 0.878 |
| EHI69453.1 | EHI70403.1 | STRIC_1024 | STRIC_0348 | Response regulator receiver domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.467 |
| EHI69453.1 | EHI70414.1 | STRIC_1024 | STRIC_0295 | Response regulator receiver domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Response regulator receiver domain protein. | 0.602 |
| EHI69576.1 | EHI69364.1 | STRIC_1026 | STRIC_1025 | ABC transporter, solute-binding protein. | Transcriptional regulator, AraC family; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.849 |
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