Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EHI68601.1 | EHI68735.1 | STRIC_0445 | STRIC_0446 | Penicillin-binding protein dimerization domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Penicillin-binding protein, transpeptidase domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.989 |
| EHI68601.1 | EHI69082.1 | STRIC_0445 | STRIC_1740 | Penicillin-binding protein dimerization domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Transglycosylase. | 0.816 |
| EHI68601.1 | EHI69231.1 | STRIC_0445 | STRIC_1693 | Penicillin-binding protein dimerization domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Kinase domain protein. | 0.732 |
| EHI68601.1 | EHI69290.1 | STRIC_0445 | STRIC_1667 | Penicillin-binding protein dimerization domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Penicillin-binding protein, 1A family. | 0.824 |
| EHI68601.1 | EHI69393.1 | STRIC_0445 | STRIC_1547 | Penicillin-binding protein dimerization domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Cell cycle protein, FtsW/RodA/SpoVE domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; Belongs to the SEDS family. | 0.795 |
| EHI68601.1 | EHI69484.1 | STRIC_0445 | STRIC_1548 | Penicillin-binding protein dimerization domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Cell cycle protein, FtsW/RodA/SpoVE domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; Belongs to the SEDS family. | 0.810 |
| EHI68601.1 | EHI70149.1 | STRIC_0445 | STRIC_2492 | Penicillin-binding protein dimerization domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Cell cycle protein, FtsW/RodA/SpoVE family; Belongs to the SEDS family. | 0.745 |
| EHI68601.1 | EHI70779.1 | STRIC_0445 | STRIC_0664 | Penicillin-binding protein dimerization domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Penicillin-binding protein, 1A family. | 0.785 |
| EHI68601.1 | divIB | STRIC_0445 | STRIC_0387 | Penicillin-binding protein dimerization domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | POTRA domain protein, FtsQ-type; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily. | 0.917 |
| EHI68601.1 | gpsB | STRIC_0445 | STRIC_1670 | Penicillin-binding protein dimerization domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Cell cycle protein GpsB; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation. | 0.739 |
| EHI68735.1 | EHI68601.1 | STRIC_0446 | STRIC_0445 | Penicillin-binding protein, transpeptidase domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Penicillin-binding protein dimerization domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.989 |
| EHI68735.1 | EHI69082.1 | STRIC_0446 | STRIC_1740 | Penicillin-binding protein, transpeptidase domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Transglycosylase. | 0.812 |
| EHI68735.1 | EHI69231.1 | STRIC_0446 | STRIC_1693 | Penicillin-binding protein, transpeptidase domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Kinase domain protein. | 0.732 |
| EHI68735.1 | EHI69290.1 | STRIC_0446 | STRIC_1667 | Penicillin-binding protein, transpeptidase domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Penicillin-binding protein, 1A family. | 0.863 |
| EHI68735.1 | EHI69393.1 | STRIC_0446 | STRIC_1547 | Penicillin-binding protein, transpeptidase domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Cell cycle protein, FtsW/RodA/SpoVE domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; Belongs to the SEDS family. | 0.913 |
| EHI68735.1 | EHI69484.1 | STRIC_0446 | STRIC_1548 | Penicillin-binding protein, transpeptidase domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Cell cycle protein, FtsW/RodA/SpoVE domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; Belongs to the SEDS family. | 0.859 |
| EHI68735.1 | EHI70149.1 | STRIC_0446 | STRIC_2492 | Penicillin-binding protein, transpeptidase domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Cell cycle protein, FtsW/RodA/SpoVE family; Belongs to the SEDS family. | 0.848 |
| EHI68735.1 | EHI70779.1 | STRIC_0446 | STRIC_0664 | Penicillin-binding protein, transpeptidase domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Penicillin-binding protein, 1A family. | 0.850 |
| EHI68735.1 | divIB | STRIC_0446 | STRIC_0387 | Penicillin-binding protein, transpeptidase domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | POTRA domain protein, FtsQ-type; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily. | 0.890 |
| EHI68735.1 | gpsB | STRIC_0446 | STRIC_1670 | Penicillin-binding protein, transpeptidase domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Cell cycle protein GpsB; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation. | 0.496 |
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