Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHI68777.1Hypothetical protein. (509 aa)    
Predicted Functional Partners:
EHI68612.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.728
uxuA
D-mannonate dehydratase (UxuA); Catalyzes the dehydration of D-mannonate.
       0.590
EHI68633.1
Hydrolase, haloacid dehalogenase-like family protein.
       0.516
EHI69962.1
Hypothetical protein.
  
     0.500
EHI70059.1
Putative phage head-tail adaptor.
  
     0.498
uxaC
Glucuronate isomerase.
       0.461
EHI70230.1
Hypothetical protein.
  
     0.459
EHI68724.1
Glycosyl hydrolase family 3, N-terminal domain protein.
       0.435
EHI70175.1
Hypothetical protein.
  
     0.434
EHI70262.1
DNA packaging protein, QLRG family.
  
     0.408
Your Current Organism:
Streptococcus ictaluri
NCBI taxonomy Id: 764299
Other names: S. ictaluri 707-05, Streptococcus ictaluri 707-05, Streptococcus ictaluri str. 707-05, Streptococcus ictaluri strain 707-05
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