Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EHI68578.1 | EHI68580.1 | STRIC_0597 | STRIC_0595 | Metal cation transporter, ZIP domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Dinuclear metal center protein, YbgI family. | 0.734 |
| EHI68578.1 | EHI68595.1 | STRIC_0597 | STRIC_0600 | Metal cation transporter, ZIP domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Putative dTDP-4-dehydrorhamnose 3,5-epimerase. | 0.619 |
| EHI68578.1 | EHI68662.1 | STRIC_0597 | STRIC_0596 | Metal cation transporter, ZIP domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | ZIP zinc transporter family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.994 |
| EHI68578.1 | EHI68664.1 | STRIC_0597 | STRIC_0593 | Metal cation transporter, ZIP domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.531 |
| EHI68578.1 | EHI68693.1 | STRIC_0597 | STRIC_0598 | Metal cation transporter, ZIP domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | FAD dependent oxidoreductase. | 0.788 |
| EHI68578.1 | EHI68773.1 | STRIC_0597 | STRIC_0594 | Metal cation transporter, ZIP domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Hypothetical protein. | 0.734 |
| EHI68578.1 | EHI70353.1 | STRIC_0597 | STRIC_0298 | Metal cation transporter, ZIP domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Cytochrome C biogenesis protein transmembrane region. | 0.440 |
| EHI68578.1 | rfbA | STRIC_0597 | STRIC_0599 | Metal cation transporter, ZIP domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.619 |
| EHI68578.1 | rfbB | STRIC_0597 | STRIC_0601 | Metal cation transporter, ZIP domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.474 |
| EHI68578.1 | sodA | STRIC_0597 | STRIC_0470 | Metal cation transporter, ZIP domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Superoxide dismutase [Mn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.423 |
| EHI68580.1 | EHI68578.1 | STRIC_0595 | STRIC_0597 | Dinuclear metal center protein, YbgI family. | Metal cation transporter, ZIP domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.734 |
| EHI68580.1 | EHI68595.1 | STRIC_0595 | STRIC_0600 | Dinuclear metal center protein, YbgI family. | Putative dTDP-4-dehydrorhamnose 3,5-epimerase. | 0.605 |
| EHI68580.1 | EHI68662.1 | STRIC_0595 | STRIC_0596 | Dinuclear metal center protein, YbgI family. | ZIP zinc transporter family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.734 |
| EHI68580.1 | EHI68664.1 | STRIC_0595 | STRIC_0593 | Dinuclear metal center protein, YbgI family. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.568 |
| EHI68580.1 | EHI68693.1 | STRIC_0595 | STRIC_0598 | Dinuclear metal center protein, YbgI family. | FAD dependent oxidoreductase. | 0.749 |
| EHI68580.1 | EHI68773.1 | STRIC_0595 | STRIC_0594 | Dinuclear metal center protein, YbgI family. | Hypothetical protein. | 0.964 |
| EHI68580.1 | rfbA | STRIC_0595 | STRIC_0599 | Dinuclear metal center protein, YbgI family. | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.605 |
| EHI68580.1 | rfbB | STRIC_0595 | STRIC_0601 | Dinuclear metal center protein, YbgI family. | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.676 |
| EHI68595.1 | EHI68578.1 | STRIC_0600 | STRIC_0597 | Putative dTDP-4-dehydrorhamnose 3,5-epimerase. | Metal cation transporter, ZIP domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.619 |
| EHI68595.1 | EHI68580.1 | STRIC_0600 | STRIC_0595 | Putative dTDP-4-dehydrorhamnose 3,5-epimerase. | Dinuclear metal center protein, YbgI family. | 0.605 |
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