Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHI70716.1Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase. (403 aa)    
Predicted Functional Partners:
EHI69826.1
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase.
  
     0.741
EHI70783.1
Toxin secretion/phage lysis holin.
       0.532
EHI70938.1
Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.
       0.501
EHI70853.1
Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.
       0.501
EHI71012.1
Hypothetical protein.
       0.501
EHI70846.1
Gp58-like domain protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.
       0.495
EHI70206.1
Phage minor structural protein, N-terminal domain protein.
 
 
   0.464
EHI68775.1
Serine-type D-Ala-D-Ala carboxypeptidase domain protein.
  
  
  0.457
EHI69325.1
Toxic anion resistance protein TelA.
  
     0.429
EHI70183.1
Phage tail tape measure protein, TP901 family; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop.
 
 
   0.428
Your Current Organism:
Streptococcus ictaluri
NCBI taxonomy Id: 764299
Other names: S. ictaluri 707-05, Streptococcus ictaluri 707-05, Streptococcus ictaluri str. 707-05, Streptococcus ictaluri strain 707-05
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