Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EHI70870.1Putative membrane protein. (297 aa)    
Predicted Functional Partners:
EHI69499.1
Ornithine cyclodeaminase.
 
     0.740
EHI70985.1
CppA family protein.
       0.706
EHI70897.1
Beta-lactamase.
       0.706
EHI69349.1
Sugar-specific transcriptional regulator, TrmB family.
 
     0.547
htrA
Serine protease do-like HtrA.
    
 
 0.470
EHI70656.1
Hypothetical protein.
       0.462
EHI69986.1
HD domain protein.
       0.462
Your Current Organism:
Streptococcus ictaluri
NCBI taxonomy Id: 764299
Other names: S. ictaluri 707-05, Streptococcus ictaluri 707-05, Streptococcus ictaluri str. 707-05, Streptococcus ictaluri strain 707-05
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