Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EHI71011.1ABC transporter, ATP-binding protein. (587 aa)    
Predicted Functional Partners:
cydC
Thiol reductant ABC exporter, CydC subunit.
  
 0.973
EHI70691.1
TIGR02185 family protein.
 
     0.893
EHI70750.1
Cobalt transport protein.
 
     0.878
EHI70932.1
ABC transporter, ATP-binding protein.
 
 
 
0.875
EHI70860.1
ABC transporter, ATP-binding protein.
 
    
0.820
EHI69711.1
Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.
 
 
  0.755
EHI68855.1
Putative cytochrome d ubiquinol oxidase, subunit II.
  
  
 0.722
isdE
Heme ABC transporter, heme-binding protein isdE.
 
     0.697
EHI70821.1
Hypothetical protein.
 
     0.656
EHI70830.1
Iron chelate uptake ABC transporter, FeCT family, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
     0.643
Your Current Organism:
Streptococcus ictaluri
NCBI taxonomy Id: 764299
Other names: S. ictaluri 707-05, Streptococcus ictaluri 707-05, Streptococcus ictaluri str. 707-05, Streptococcus ictaluri strain 707-05
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