Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EHI70630.1 | EHI70804.1 | STRIC_0040 | STRIC_0870 | Metallo-beta-lactamase domain protein. | Pyridine nucleotide-disulfide oxidoreductase, dimerization domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.946 |
| EHI70630.1 | EHI70866.1 | STRIC_0040 | STRIC_0871 | Metallo-beta-lactamase domain protein. | Rhodanese-like protein. | 0.788 |
| EHI70630.1 | EHI70908.1 | STRIC_0040 | STRIC_0869 | Metallo-beta-lactamase domain protein. | Pyridine nucleotide-disulfide oxidoreductase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.946 |
| EHI70630.1 | EHI70964.1 | STRIC_0040 | STRIC_0868 | Metallo-beta-lactamase domain protein. | Rhodanese-like protein. | 0.788 |
| EHI70630.1 | EHI71013.1 | STRIC_0040 | STRIC_0629 | Metallo-beta-lactamase domain protein. | Glyoxalase family protein. | 0.827 |
| EHI70630.1 | rpsQ | STRIC_0040 | STRIC_0226 | Metallo-beta-lactamase domain protein. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.562 |
| EHI70630.1 | ybeY | STRIC_0040 | STRIC_2336 | Metallo-beta-lactamase domain protein. | Metalloprotein, YbeY family; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.732 |
| EHI70804.1 | EHI70630.1 | STRIC_0870 | STRIC_0040 | Pyridine nucleotide-disulfide oxidoreductase, dimerization domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Metallo-beta-lactamase domain protein. | 0.946 |
| EHI70804.1 | EHI70866.1 | STRIC_0870 | STRIC_0871 | Pyridine nucleotide-disulfide oxidoreductase, dimerization domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Rhodanese-like protein. | 0.866 |
| EHI70804.1 | EHI70908.1 | STRIC_0870 | STRIC_0869 | Pyridine nucleotide-disulfide oxidoreductase, dimerization domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Pyridine nucleotide-disulfide oxidoreductase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.998 |
| EHI70804.1 | EHI70964.1 | STRIC_0870 | STRIC_0868 | Pyridine nucleotide-disulfide oxidoreductase, dimerization domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Rhodanese-like protein. | 0.846 |
| EHI70804.1 | EHI71013.1 | STRIC_0870 | STRIC_0629 | Pyridine nucleotide-disulfide oxidoreductase, dimerization domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Glyoxalase family protein. | 0.821 |
| EHI70804.1 | rplQ | STRIC_0870 | STRIC_0244 | Pyridine nucleotide-disulfide oxidoreductase, dimerization domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Ribosomal protein L17. | 0.999 |
| EHI70804.1 | rplU | STRIC_0870 | STRIC_1454 | Pyridine nucleotide-disulfide oxidoreductase, dimerization domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.703 |
| EHI70804.1 | rpsQ | STRIC_0870 | STRIC_0226 | Pyridine nucleotide-disulfide oxidoreductase, dimerization domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.995 |
| EHI70804.1 | sodA | STRIC_0870 | STRIC_0470 | Pyridine nucleotide-disulfide oxidoreductase, dimerization domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Superoxide dismutase [Mn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.999 |
| EHI70804.1 | ybeY | STRIC_0870 | STRIC_2336 | Pyridine nucleotide-disulfide oxidoreductase, dimerization domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Metalloprotein, YbeY family; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.769 |
| EHI70866.1 | EHI70630.1 | STRIC_0871 | STRIC_0040 | Rhodanese-like protein. | Metallo-beta-lactamase domain protein. | 0.788 |
| EHI70866.1 | EHI70804.1 | STRIC_0871 | STRIC_0870 | Rhodanese-like protein. | Pyridine nucleotide-disulfide oxidoreductase, dimerization domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.866 |
| EHI70866.1 | EHI70908.1 | STRIC_0871 | STRIC_0869 | Rhodanese-like protein. | Pyridine nucleotide-disulfide oxidoreductase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.842 |
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