Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHI70974.1PTS system, mannose/fructose/sorbose family, IID component. (303 aa)    
Predicted Functional Partners:
EHI70919.1
PTS system sorbose-specific iic component.
 0.999
EHI70852.1
PTS system sorbose subfamily IIB component.
 
 0.999
EHI69893.1
PTS system sorbose-specific iic component.
 0.990
EHI70661.1
PTS system sorbose-specific iic component.
 0.966
EHI70625.1
PTS system fructose IIA component.
 
 0.965
EHI71001.1
Hypothetical protein.
 
   
 0.958
EHI69899.1
PTS system sorbose subfamily IIB component.
 
 0.955
EHI70619.1
PTS system sorbose subfamily IIB component.
 
 0.954
EHI69784.1
PTS system fructose IIA component.
  
 0.953
ptsH
Phosphocarrier protein HPr.
    
 0.911
Your Current Organism:
Streptococcus ictaluri
NCBI taxonomy Id: 764299
Other names: S. ictaluri 707-05, Streptococcus ictaluri 707-05, Streptococcus ictaluri str. 707-05, Streptococcus ictaluri strain 707-05
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