Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHI69880.1ABC transporter, ATP-binding protein. (209 aa)    
Predicted Functional Partners:
EHI69359.1
ABC transporter, permease protein.
 0.997
EHI69507.1
NMT1/THI5-like protein.
 
 0.994
EHI68574.1
ABC transporter, permease protein.
 
 0.968
EHI68684.1
ABC transporter, permease protein.
 0.936
EHI70123.1
ABC transporter, ATP-binding protein.
 
    
0.900
EHI70283.1
Putative glutamine ABC transporter, permease protein GlnP.
 
 0.899
EHI69324.1
ABC transporter, permease protein.
 
 0.878
EHI69827.1
Efflux ABC transporter, permease protein.
 
     0.877
EHI70160.1
Putative glutamine ABC transporter, permease protein GlnM.
 0.863
EHI69086.1
ABC transporter, permease protein.
 
 0.860
Your Current Organism:
Streptococcus ictaluri
NCBI taxonomy Id: 764299
Other names: S. ictaluri 707-05, Streptococcus ictaluri 707-05, Streptococcus ictaluri str. 707-05, Streptococcus ictaluri strain 707-05
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