Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHI69358.1Hypothetical protein. (193 aa)    
Predicted Functional Partners:
EHI69559.1
Putative membrane protein.
 
   
 0.969
EHI69596.1
Hypothetical protein.
 
     0.948
EHI69737.1
Hypothetical protein.
 
     0.941
EHI69522.1
CsbD-like protein; Belongs to the UPF0337 (CsbD) family.
 
   
 0.853
EHI69428.1
Transglycosylase associated protein.
 
     0.831
EHI69780.1
CsbD-like protein; Belongs to the UPF0337 (CsbD) family.
 
   
 0.600
EHI68686.1
FR47-like protein.
  
     0.593
EHI68775.1
Serine-type D-Ala-D-Ala carboxypeptidase domain protein.
  
     0.546
EHI68781.1
CHAP domain protein.
  
     0.543
EHI69539.1
Hypothetical protein.
  
     0.541
Your Current Organism:
Streptococcus ictaluri
NCBI taxonomy Id: 764299
Other names: S. ictaluri 707-05, Streptococcus ictaluri 707-05, Streptococcus ictaluri str. 707-05, Streptococcus ictaluri strain 707-05
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