Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHI69718.1P22 coat protein - protein 5 domain protein. (285 aa)    
Predicted Functional Partners:
EHI69789.1
Hypothetical protein.
       0.752
EHI69917.1
Phage minor structural protein GP20.
       0.745
EHI69665.1
Hypothetical protein.
       0.672
EHI69652.1
Hypothetical protein.
 
     0.556
EHI69219.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
     
  0.500
EHI70088.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
     
  0.500
EHI69678.1
Hypothetical protein.
       0.489
EHI69850.1
Hypothetical protein; Identified by glimmer; putative.
       0.440
EHI69389.1
Phage Mu protein F-like protein.
 
     0.428
Your Current Organism:
Streptococcus ictaluri
NCBI taxonomy Id: 764299
Other names: S. ictaluri 707-05, Streptococcus ictaluri 707-05, Streptococcus ictaluri str. 707-05, Streptococcus ictaluri strain 707-05
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