Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EHI69258.1Transcriptional regulator, DeoR family. (256 aa)    
Predicted Functional Partners:
lacC
Tagatose-6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
  
 0.954
lacB
Galactose-6-phosphate isomerase, LacB subunit.
 
  
 0.829
lacA
Galactose-6-phosphate isomerase, LacA subunit.
 
  
 0.784
EHI68850.1
PTS system, Lactose/Cellobiose specific IIB subunit domain protein.
 
   
 0.741
EHI69928.1
PTS system, Fru family, IIC component domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.
 
  
 0.728
EHI69417.1
PTS system, Lactose/Cellobiose specific IIB subunit; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.
 
  
 0.728
EHI69080.1
Phosphoenolpyruvate-dependent sugar PTS family porter, EIIA 2.
  
  
 0.681
EHI70352.1
Glycosyl hydrolase, family 1; Belongs to the glycosyl hydrolase 1 family.
     
 0.605
lacD
Deoxyribose-phosphate aldolase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; Belongs to the aldolase LacD family.
 
   
 0.603
EHI69010.1
Putative tagatose 1,6-pyrophosphate aldolase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop.
 
   
 0.583
Your Current Organism:
Streptococcus ictaluri
NCBI taxonomy Id: 764299
Other names: S. ictaluri 707-05, Streptococcus ictaluri 707-05, Streptococcus ictaluri str. 707-05, Streptococcus ictaluri strain 707-05
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