Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EHI68894.1 | EHI69362.1 | STRIC_1699 | STRIC_1233 | Putative cysteine synthase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Maltose acetyltransferase. | 0.839 |
| EHI68894.1 | EHI69449.1 | STRIC_1699 | STRIC_1217 | Putative cysteine synthase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein. | 0.949 |
| EHI68894.1 | EHI69499.1 | STRIC_1699 | STRIC_1031 | Putative cysteine synthase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Ornithine cyclodeaminase. | 0.812 |
| EHI68894.1 | EHI70804.1 | STRIC_1699 | STRIC_0870 | Putative cysteine synthase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Pyridine nucleotide-disulfide oxidoreductase, dimerization domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.880 |
| EHI68894.1 | EHI70908.1 | STRIC_1699 | STRIC_0869 | Putative cysteine synthase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Pyridine nucleotide-disulfide oxidoreductase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.880 |
| EHI68894.1 | cysE | STRIC_1699 | STRIC_0791 | Putative cysteine synthase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Serine O-acetyltransferase. | 0.986 |
| EHI68894.1 | cysS | STRIC_1699 | STRIC_0792 | Putative cysteine synthase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | cysteine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.970 |
| EHI68894.1 | gshAB | STRIC_1699 | STRIC_1791 | Putative cysteine synthase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Glutamate--cysteine ligase/gamma-glutamylcysteine synthetase; Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine; In the N-terminal section; belongs to the glutamate--cysteine ligase type 1 family. Type 2 subfamily. | 0.907 |
| EHI68894.1 | guaA | STRIC_1699 | STRIC_1283 | Putative cysteine synthase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | GMP synthase (glutamine-hydrolyzing), C-terminal domain protein; Catalyzes the synthesis of GMP from XMP. | 0.848 |
| EHI68894.1 | guaB | STRIC_1699 | STRIC_0145 | Putative cysteine synthase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.823 |
| EHI69362.1 | EHI68894.1 | STRIC_1233 | STRIC_1699 | Maltose acetyltransferase. | Putative cysteine synthase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.839 |
| EHI69362.1 | cysE | STRIC_1233 | STRIC_0791 | Maltose acetyltransferase. | Serine O-acetyltransferase. | 0.772 |
| EHI69449.1 | EHI68894.1 | STRIC_1217 | STRIC_1699 | Bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein. | Putative cysteine synthase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.949 |
| EHI69449.1 | EHI70804.1 | STRIC_1217 | STRIC_0870 | Bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein. | Pyridine nucleotide-disulfide oxidoreductase, dimerization domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.778 |
| EHI69449.1 | EHI70908.1 | STRIC_1217 | STRIC_0869 | Bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein. | Pyridine nucleotide-disulfide oxidoreductase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.778 |
| EHI69449.1 | cysE | STRIC_1217 | STRIC_0791 | Bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein. | Serine O-acetyltransferase. | 0.685 |
| EHI69449.1 | cysS | STRIC_1217 | STRIC_0792 | Bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein. | cysteine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.870 |
| EHI69449.1 | guaA | STRIC_1217 | STRIC_1283 | Bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein. | GMP synthase (glutamine-hydrolyzing), C-terminal domain protein; Catalyzes the synthesis of GMP from XMP. | 0.666 |
| EHI69449.1 | guaB | STRIC_1217 | STRIC_0145 | Bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.828 |
| EHI69499.1 | EHI68894.1 | STRIC_1031 | STRIC_1699 | Ornithine cyclodeaminase. | Putative cysteine synthase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.812 |
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