Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EHI68975.1Bacterial cytochrome ubiquinol oxidase domain protein. (138 aa)    
Predicted Functional Partners:
EHI68855.1
Putative cytochrome d ubiquinol oxidase, subunit II.
 0.999
cydA
Cytochrome d ubiquinol oxidase, subunit I.
 
  
  0.988
cydD
Thiol reductant ABC exporter, CydD subunit.
 
  
 0.822
cydC
Thiol reductant ABC exporter, CydC subunit.
 
  
 0.780
EHI69039.1
Pyridine nucleotide-disulfide oxidoreductase.
 
   
 0.666
EHI68810.1
Prenyltransferase, UbiA family.
 
     0.608
EHI71011.1
ABC transporter, ATP-binding protein.
  
  
 0.599
Your Current Organism:
Streptococcus ictaluri
NCBI taxonomy Id: 764299
Other names: S. ictaluri 707-05, Streptococcus ictaluri 707-05, Streptococcus ictaluri str. 707-05, Streptococcus ictaluri strain 707-05
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