Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHI69172.1Hypothetical protein. (109 aa)    
Predicted Functional Partners:
EHI68910.1
Hypothetical protein.
       0.852
EHI68938.1
N-6 DNA Methylase.
       0.757
EHI68821.1
Type II/IV secretion system protein.
     
 0.717
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
     
 0.713
EHI69252.1
Prepilin-type cleavage/methylation N-terminal domain protein.
     
 0.686
EHI68942.1
Type II secretion system F domain protein.
       0.645
EHI69310.1
Competence protein CglD family protein.
       0.645
EHI69071.1
Hypothetical protein.
       0.558
EHI69189.1
DNA-binding helix-turn-helix protein.
       0.508
EHI68978.1
Hypothetical protein.
       0.484
Your Current Organism:
Streptococcus ictaluri
NCBI taxonomy Id: 764299
Other names: S. ictaluri 707-05, Streptococcus ictaluri 707-05, Streptococcus ictaluri str. 707-05, Streptococcus ictaluri strain 707-05
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