STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHI68899.1ABC transporter, ATP-binding protein. (246 aa)    
Predicted Functional Partners:
EHI69324.1
ABC transporter, permease protein.
 
 0.998
EHI68684.1
ABC transporter, permease protein.
 0.984
EHI70283.1
Putative glutamine ABC transporter, permease protein GlnP.
 
 0.978
EHI69359.1
ABC transporter, permease protein.
 0.972
EHI70160.1
Putative glutamine ABC transporter, permease protein GlnM.
 0.972
EHI68574.1
ABC transporter, permease protein.
 
 0.964
EHI69086.1
ABC transporter, permease protein.
 
 0.931
EHI69439.1
ABC transporter, permease protein.
 0.930
EHI69705.1
ABC transporter, substrate-binding protein, family 3.
 
 0.891
EHI70170.1
ABC transporter, ATP-binding domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.
 
     
0.848
Your Current Organism:
Streptococcus ictaluri
NCBI taxonomy Id: 764299
Other names: S. ictaluri 707-05, Streptococcus ictaluri 707-05, Streptococcus ictaluri str. 707-05, Streptococcus ictaluri strain 707-05
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.