Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EHI68957.1PTS system, Lactose/Cellobiose specific IIB subunit. (94 aa)    
Predicted Functional Partners:
EHI68805.1
PTS system sugar-specific permease protein.
 
 
 0.997
EHI68841.1
Phosphoenolpyruvate-dependent sugar PTS family porter, EIIA 2.
 
 
 0.996
EHI70755.1
Phosphoenolpyruvate-dependent sugar PTS family porter, EIIA 2.
 
 
 0.989
EHI70979.1
PTS system sugar-specific permease protein.
 
 
 0.973
EHI70792.1
PTS system, Lactose/Cellobiose specific IIB subunit.
  
  
  0.953
EHI70865.1
Hypothetical protein.
  
 
 0.896
EHI68866.1
Transketolase, thiamine pyrophosphate-binding domain protein.
 
    0.892
ptsH
Phosphocarrier protein HPr.
    
  0.889
EHI69225.1
Transketolase, C-terminal domain protein.
 
     0.880
EHI69181.1
Phosphoenolpyruvate-dependent sugar PTS family porter, EIIA 2; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.
 
 
 0.710
Your Current Organism:
Streptococcus ictaluri
NCBI taxonomy Id: 764299
Other names: S. ictaluri 707-05, Streptococcus ictaluri 707-05, Streptococcus ictaluri str. 707-05, Streptococcus ictaluri strain 707-05
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