Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
EHI69968.1Putative phage terminase, large subunit. (530 aa)    
Predicted Functional Partners:
EHI70203.1
Phage portal protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop.
 
   
 0.944
EHI70074.1
Hypothetical protein.
 
     0.918
EHI70051.1
DNA (cytosine-5-)-methyltransferase; Overlaps another CDS with the same product name; Belongs to the N(4)/N(6)-methyltransferase family.
 
     0.884
EHI70192.1
Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop.
 
   
 0.883
EHI69963.1
Phage major capsid protein, HK97 family.
 
     0.880
EHI70112.1
ATP-dependent Clp endopeptidase, proteolytic subunit ClpP-like protein; Belongs to the peptidase S14 family.
 
     0.871
EHI70245.1
Putative phage terminase, small subunit.
 
     0.863
EHI69955.1
Toxin secretion/phage lysis holin.
 
     0.791
EHI70262.1
DNA packaging protein, QLRG family.
 
     0.696
dcm
DNA (cytosine-5-)-methyltransferase; Overlaps another CDS with the same product name.
 
     0.675
Your Current Organism:
Streptococcus ictaluri
NCBI taxonomy Id: 764299
Other names: S. ictaluri 707-05, Streptococcus ictaluri 707-05, Streptococcus ictaluri str. 707-05, Streptococcus ictaluri strain 707-05
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