Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EHI70254.1Siphovirus. (160 aa)    
Predicted Functional Partners:
EHI70275.1
Erf family protein.
       0.790
ssb_4
Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
       0.787
EHI70202.1
Hypothetical protein.
       0.731
EHI70198.1
Hypothetical protein.
       0.715
EHI70686.1
VRR-NUC domain protein.
 
     0.667
EHI70628.1
Bifunctional DNA primase/polymerase, N-terminal domain protein.
 
     0.652
EHI70647.1
Phage nucleotide-binding protein.
 
     0.571
EHI70662.1
Phage major capsid protein, HK97 family.
  
     0.566
EHI70671.1
Hypothetical protein.
 
     0.549
EHI70678.1
Type III restriction enzyme, res subunit.
 
     0.519
Your Current Organism:
Streptococcus ictaluri
NCBI taxonomy Id: 764299
Other names: S. ictaluri 707-05, Streptococcus ictaluri 707-05, Streptococcus ictaluri str. 707-05, Streptococcus ictaluri strain 707-05
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