Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHI70184.1Minor capsid. (118 aa)    
Predicted Functional Partners:
EHI70277.1
Hypothetical protein.
       0.852
EHI70005.1
Hypothetical protein.
       0.852
EHI70049.1
Bacteriophage Gp15 protein.
       0.760
EHI70288.1
Putative phage tail component, N-terminal domain protein.
       0.654
EHI69964.1
Tape measure domain protein.
       0.649
EHI70225.1
Hypothetical protein.
       0.645
EHI70206.1
Phage minor structural protein, N-terminal domain protein.
       0.635
EHI70279.1
Hypothetical protein.
       0.628
EHI70090.1
Hypothetical protein.
       0.623
EHI70028.1
Hypothetical protein.
       0.623
Your Current Organism:
Streptococcus ictaluri
NCBI taxonomy Id: 764299
Other names: S. ictaluri 707-05, Streptococcus ictaluri 707-05, Streptococcus ictaluri str. 707-05, Streptococcus ictaluri strain 707-05
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