STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002105195_02541Unannotated protein. (317 aa)    
Predicted Functional Partners:
GCA_002105195_00124
Unannotated protein.
  
 
  0.822
GCA_002105195_02144
Unannotated protein.
     
 0.806
GCA_002105195_00080
Unannotated protein.
     
 0.798
GCA_002105195_02625
Unannotated protein.
     
 0.798
GCA_002105195_02725
Unannotated protein.
     
 0.798
GCA_002105195_03604
Unannotated protein.
     
 0.798
GCA_002105195_04058
Unannotated protein.
     
 0.798
GCA_002105195_04082
Unannotated protein.
     
 0.798
GCA_002105195_04348
Unannotated protein.
     
 0.798
GCA_002105195_00132
Unannotated protein.
   
 
  0.796
Your Current Organism:
Derxia lacustris
NCBI taxonomy Id: 764842
Other names: BCRC 80208, D. lacustris, Derxia lacustris Chen et al. 2013, Derxia sp. HL-12, KCTC 23311, strain HL-12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.