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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV64550.1Radical SAM domain protein; COGs: COG1032 Fe-S oxidoreductase; InterPro IPR006638: IPR006158: IPR007197; KEGG: dka:DKAM_0049 radical SAM domain protein; PFAM: Radical SAM domain protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Radical SAM domain protein; PFAM: Radical SAM superfamily; B12 binding domain. (528 aa)    
Predicted Functional Partners:
ADV64597.1
KEGG: dka:DKAM_0769 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  
 0.733
ADV64552.1
KEGG: dka:DKAM_0048 putative phosphate transport regulator; SPTR: Putative phosphate transport regulator; PFAM: Protein of unknown function DUF47.
       0.615
ADV64551.1
COGs: COG1676 tRNA splicing endonuclease; InterPro IPR016442: IPR006676: IPR006678: IPR006677; KEGG: shc:Shell_1338 tRNA intron endonuclease; PFAM: tRNA intron endonuclease, catalytic domain-containing protein; tRNA intron endonuclease domain-containing protein; SPTR: tRNA intron endonuclease; TIGRFAM: tRNA intron endonuclease; PFAM: tRNA intron endonuclease, catalytic C-terminal domain; tRNA intron endonuclease, N-terminal domain; TIGRFAM: tRNA intron endonuclease.
       0.605
Your Current Organism:
Desulfurococcus mucosus
NCBI taxonomy Id: 765177
Other names: D. mucosus DSM 2162, Desulfurococcus mucosus DSM 2162, Desulfurococcus mucosus JCM 9187, Desulfurococcus mucosus str. DSM 2162, Desulfurococcus mucosus strain DSM 2162
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