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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV64659.1KEGG: dka:DKAM_0597 hypothetical protein; SPTR: Putative uncharacterized protein. (89 aa)    
Predicted Functional Partners:
ADV64660.1
KEGG: dka:DKAM_0598 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.876
ADV64661.1
Protein of unknown function DUF58; COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: dka:DKAM_0599 protein of unknown function DUF58; PFAM: protein of unknown function DUF58; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF58.
       0.876
ADV64656.1
ATPase associated with various cellular activities AAA_3; COGs: COG0714 MoxR-like ATPase; InterPro IPR003593: IPR016366: IPR011703; KEGG: dka:DKAM_0594 ATPase associated with various cellular activities, AAA_3; PFAM: ATPase associated with various cellular activities AAA_3; SMART: AAA ATPase; SPTR: ATPase associated with various cellular activities, AAA_3; PFAM: ATPase family associated with various cellular activities (AAA).
       0.818
ADV64658.1
KEGG: dka:DKAM_0596 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.818
ADV64657.1
KEGG: dka:DKAM_0595 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
ADV64662.1
Rubrerythrin; InterPro IPR003251; KEGG: dka:DKAM_0600 Linocin_M18 bacteriocin protein; PFAM: Rubrerythrin; SPTR: Linocin_M18 bacteriocin protein; PFAM: Rubrerythrin.
       0.591
ADV64663.1
KEGG: dka:DKAM_0601 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Rubrerythrin.
       0.591
ADV64655.1
Alpha amylase catalytic region; COGs: COG0366 Glycosidase; InterPro IPR006589: IPR006047; KEGG: smr:Smar_0613 alpha amylase, catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Alpha amylase, catalytic region; PFAM: Alpha amylase, catalytic domain.
       0.535
Your Current Organism:
Desulfurococcus mucosus
NCBI taxonomy Id: 765177
Other names: D. mucosus DSM 2162, Desulfurococcus mucosus DSM 2162, Desulfurococcus mucosus JCM 9187, Desulfurococcus mucosus str. DSM 2162, Desulfurococcus mucosus strain DSM 2162
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