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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV64763.1KEGG: hbu:Hbut_1172 hypothetical protein; SPTR: Putative uncharacterized protein. (230 aa)    
Predicted Functional Partners:
ADV64759.1
KEGG: hbu:Hbut_1168 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein.
       0.773
ADV64760.1
KEGG: hbu:Hbut_1169 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
ADV64761.1
COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: hbu:Hbut_1170 hypothetical protein; PFAM: glycosyl transferase family 2; SPTR: Universally conserved protein; PFAM: Glycosyl transferase family 2.
       0.773
ADV64762.1
Regulatory protein ArsR; InterPro IPR001845; KEGG: hbu:Hbut_1171 hypothetical protein; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Putative uncharacterized protein; PFAM: Bacterial regulatory protein, arsR family.
       0.773
Your Current Organism:
Desulfurococcus mucosus
NCBI taxonomy Id: 765177
Other names: D. mucosus DSM 2162, Desulfurococcus mucosus DSM 2162, Desulfurococcus mucosus JCM 9187, Desulfurococcus mucosus str. DSM 2162, Desulfurococcus mucosus strain DSM 2162
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