STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV64846.1KEGG: tpe:Tpen_1629 hypothetical protein; SPTR: Putative uncharacterized protein. (112 aa)    
Predicted Functional Partners:
ADV64847.1
KEGG: dka:DKAM_0172 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
ADV64848.1
KEGG: tag:Tagg_0975 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
ADV64849.1
Band 7 protein; COGs: COG4260 Putative virion core protein (lumpy skin disease virus); InterPro IPR001107; KEGG: tag:Tagg_0976 band 7 protein; PFAM: band 7 protein; SPTR: Band 7 protein; PFAM: SPFH domain / Band 7 family.
       0.762
ADV64850.1
KEGG: tag:Tagg_0977 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.762
ADV64851.1
COGs: COG0160 4-aminobutyrate aminotransferase and related aminotransferase; InterPro IPR005814; KEGG: pab:PAB0086 pyridoxal phosphate-dependent aminotransferase; PFAM: aminotransferase class-III; SPTR: Pyridoxal phosphate-dependent aminotransferase; PFAM: Aminotransferase class-III; TIGRFAM: 4-aminobutyrate aminotransferase, prokaryotic type; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.599
Your Current Organism:
Desulfurococcus mucosus
NCBI taxonomy Id: 765177
Other names: D. mucosus DSM 2162, Desulfurococcus mucosus DSM 2162, Desulfurococcus mucosus JCM 9187, Desulfurococcus mucosus str. DSM 2162, Desulfurococcus mucosus strain DSM 2162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.