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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV64976.1KEGG: dka:DKAM_0284 hypothetical protein; SPTR: Putative uncharacterized protein. (95 aa)    
Predicted Functional Partners:
ADV64975.1
KEGG: dka:DKAM_0283 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.856
ADV64974.1
GtrA family protein; COGs: COG2246 membrane protein; InterPro IPR007267; KEGG: dka:DKAM_0282 GtrA family protein; PFAM: GtrA family protein; SPTR: GtrA family protein; PFAM: GtrA-like protein.
       0.809
ADV64973.1
Phage SPO1 DNA polymerase-related protein; COGs: COG1573 Uracil-DNA glycosylase; InterPro IPR005273: IPR005122; KEGG: dka:DKAM_0281 predicted uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase superfamily; SPTR: Predicted Uracil-DNA glycosylase; TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4.
       0.579
Your Current Organism:
Desulfurococcus mucosus
NCBI taxonomy Id: 765177
Other names: D. mucosus DSM 2162, Desulfurococcus mucosus DSM 2162, Desulfurococcus mucosus JCM 9187, Desulfurococcus mucosus str. DSM 2162, Desulfurococcus mucosus strain DSM 2162
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