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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV65135.1Auxin Efflux Carrier; InterPro IPR004776; KEGG: dka:DKAM_0434 membrane protein of unknown function DUF63; PFAM: Auxin Efflux Carrier; SPTR: Putative uncharacterized protein. (297 aa)    
Predicted Functional Partners:
htpX
Heat shock protein; COGs: COG0501 Zn-dependent protease with chaperone function; InterPro IPR001915; KEGG: dka:DKAM_0358 probable protease HtpX - like protein; PFAM: peptidase M48 Ste24p; SPTR: Probable protease htpX-like protein; PFAM: Peptidase family M48; Belongs to the peptidase M48B family.
  
  
 0.816
ADV65284.1
L-carnitine dehydratase/bile acid-inducible protein F; COGs: COG1804 acyl-CoA transferase/carnitine dehydratase; InterPro IPR003673; KEGG: dka:DKAM_0195 formyl-CoA transferase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; SPTR: Formyl-CoA transferase; PFAM: CoA-transferase family III.
  
  
 0.540
ADV64876.1
COGs: COG0519 GMP synthase PP-ATPase domain/subunit; InterProIPR017926: IPR006220: IPR011702: IPR004739: IPR 001674: IPR000991; KEGG: dka:DKAM_0479 GMP synthase; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I; SPTR: GMP synthase; TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase C terminal domain; Glutamine amidotransferase class-I; NAD synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit.
       0.515
ADV65136.1
COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: dka:DKAM_0865 peptide ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Peptide ABC transporter, permease protein; PFAM: Binding-protein-dependent transport system inner membrane component.
  
    0.456
ADV65143.1
PA14 domain protein; InterPro IPR011658; KEGG: dka:DKAM_0435 PA14 domain protein; SMART: PA14 domain protein; SPTR: PA14 domain protein; PFAM: PA14 domain.
       0.424
ADV65137.1
COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: dka:DKAM_0866 ABC-type dipeptide/oligopeptide/nickel transport system, permease component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: ABC-type dipeptide/oligopeptide/nickel transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
       0.412
ADV65138.1
Extracellular solute-binding protein family 5; COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR000914; KEGG: dka:DKAM_0867 oligopeptide/dipeptide ABC transporter, periplasmic peptide-binding protein; PFAM: extracellular solute-binding protein family 5; SPTR: Oligopeptide/dipeptide ABC transporter, periplasmic peptide-binding protein; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle.
       0.407
Your Current Organism:
Desulfurococcus mucosus
NCBI taxonomy Id: 765177
Other names: D. mucosus DSM 2162, Desulfurococcus mucosus DSM 2162, Desulfurococcus mucosus JCM 9187, Desulfurococcus mucosus str. DSM 2162, Desulfurococcus mucosus strain DSM 2162
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