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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV65161.1Radical SAM domain protein; COGs: COG1533 DNA repair photolyase; InterPro IPR007197; KEGG: dka:DKAM_0806 DNA photolyase; PFAM: Radical SAM domain protein; SPTR: DNA photolyase. (393 aa)    
Predicted Functional Partners:
ADV65091.1
Radical SAM domain protein; COGs: COG1533 DNA repair photolyase; InterPro IPR007197: IPR006638; KEGG: dka:DKAM_0380 DNA repair photolyase; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: DNA repair photolyase; PFAM: Radical SAM superfamily.
  
     0.484
ADV65039.1
PhoH family protein; COGs: COG1702 Phosphate starvation-inducible protein PhoH predicted ATPase; InterPro IPR003714: IPR004044: IPR003593: IPR004088; KEGG: dka:DKAM_0327 PhoH family protein; PFAM: PhoH family protein; KH type 2 domain protein; SMART: AAA ATPase; SPTR: PhoH family protein; PFAM: KH domain; PhoH-like protein.
  
     0.473
ADV64910.1
KEGG: dka:DKAM_0570 SNARE associated Golgi protein; SPTR: SNARE associated Golgi protein; PFAM: SNARE associated Golgi protein.
 
     0.451
lysS
COGs: COG1384 Lysyl-tRNA synthetase (class I); InterPro IPR002904: IPR020754; KEGG: dka:DKAM_0622 lysyl-tRNA synthetase; PFAM: Lysyl-tRNA synthetase, class Ic; PRIAM: Lysine--tRNA ligase; SPTR: Lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetases class I (K); TIGRFAM: lysyl-tRNA synthetase, archaeal and spirochete; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
     0.438
ADV64811.1
Metallophosphoesterase; COGs: COG3889 solute binding protein; InterPro IPR003529: IPR004843; KEGG: dka:DKAM_0637 metallophosphoesterase; PFAM: metallophosphoesterase; SPTR: Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase.
 
     0.438
ADV64809.1
Extracellular solute-binding protein family 1; COGs: COG1840 ABC-type Fe3+ transport system periplasmic component; InterPro IPR006059; KEGG: dka:DKAM_0639 extracellular solute-binding protein, family 1; PFAM: extracellular solute-binding protein family 1; SPTR: Extracellular solute-binding protein, family 1; PFAM: Bacterial extracellular solute-binding protein.
 
     0.436
ADV64370.1
InterPro IPR000620; KEGG: tag:Tagg_0049 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: Putative uncharacterized protein; PFAM: EamA-like transporter family.
 
     0.405
Your Current Organism:
Desulfurococcus mucosus
NCBI taxonomy Id: 765177
Other names: D. mucosus DSM 2162, Desulfurococcus mucosus DSM 2162, Desulfurococcus mucosus JCM 9187, Desulfurococcus mucosus str. DSM 2162, Desulfurococcus mucosus strain DSM 2162
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