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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV65177.1Helix-turn-helix Fis-type; InterPro IPR002197; KEGG: dka:DKAM_0822 hypothetical protein; PFAM: helix-turn-helix Fis-type; SPTR: Putative uncharacterized protein; PFAM: Bacterial regulatory protein, Fis family. (302 aa)    
Predicted Functional Partners:
ADV65176.1
KEGG: dka:DKAM_0821 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.710
eif5a
Translation initiation factor 5A precursor (eIF-5A); Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family.
       0.523
ADV65330.1
Phosphoprotein phosphatase; InterPro IPR006186: IPR004843; KEGG: dka:DKAM_1027 serine/threonine protein phosphatase; PFAM: metallophosphoesterase; PRIAM: Phosphoprotein phosphatase; SMART: serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase; SPTR: Serine/threonine protein phosphatase; PFAM: Calcineurin-like phosphoesterase.
       0.408
Your Current Organism:
Desulfurococcus mucosus
NCBI taxonomy Id: 765177
Other names: D. mucosus DSM 2162, Desulfurococcus mucosus DSM 2162, Desulfurococcus mucosus JCM 9187, Desulfurococcus mucosus str. DSM 2162, Desulfurococcus mucosus strain DSM 2162
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