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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV65226.1KEGG: dka:DKAM_0903 hypothetical protein; SPTR: Putative uncharacterized protein. (45 aa)    
Predicted Functional Partners:
ADV65225.1
Protein of unknown function UPF0153; InterPro IPR005358; KEGG: dka:DKAM_0904 putative Fe-S oxidoreductase; PFAM: protein of unknown function UPF0153; SPTR: Putative Fe-S oxidoreductase; PFAM: Uncharacterised protein family (UPF0153).
       0.786
ADV65227.1
KEGG: dka:DKAM_0902 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.576
ADV65224.1
COGs: COG0656 Aldo/keto reductase related to diketogulonate reductase; InterPro IPR018170: IPR020471: IPR001395; KEGG: dka:DKAM_0905 putative oxidoreductase, aldo/keto reductase family; PFAM: aldo/keto reductase; SPTR: Putative oxidoreductase, aldo/keto reductase family; PFAM: Aldo/keto reductase family.
       0.470
ADV65228.1
Regulatory protein IclR; InterPro IPR005471: IPR001845; KEGG: dka:DKAM_0901 membrane protein; PFAM: regulatory protein IclR; SMART: regulatory protein ArsR; SPTR: Uncharacterized membrane-associated protein/domain; PFAM: IclR helix-turn-helix domain.
       0.427
Your Current Organism:
Desulfurococcus mucosus
NCBI taxonomy Id: 765177
Other names: D. mucosus DSM 2162, Desulfurococcus mucosus DSM 2162, Desulfurococcus mucosus JCM 9187, Desulfurococcus mucosus str. DSM 2162, Desulfurococcus mucosus strain DSM 2162
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