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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV65233.1COGs: COG2388 acetyltransferase; InterPro IPR000182; KEGG: dka:DKAM_0894 predicted acetyltransferase; SPTR: Predicted acetyltransferase; PFAM: Acetyltransferase (GNAT) family. (122 aa)    
Predicted Functional Partners:
ADV65234.1
MoaD family protein; InterPro IPR010038: IPR003749; KEGG: dka:DKAM_0893 molybdopterin converting factor, small subunit; PFAM: thiamineS protein; SPTR: Molybdopterin converting factor, small subunit; TIGRFAM: MoaD family protein; PFAM: ThiS family; TIGRFAM: MoaD family protein, archaeal.
       0.830
ADV65029.1
COGs: COG0120 Ribose 5-phosphate isomerase; InterPro IPR004788; KEGG: dka:DKAM_0464 ribose 5-phosphate isomerase; PFAM: Ribose 5-phosphate isomerase; PRIAM: Ribose-5-phosphate isomerase; SPTR: Ribose 5-phosphate isomerase; TIGRFAM: ribose 5-phosphate isomerase; PFAM: Ribose 5-phosphate isomerase A (phosphoriboisomerase A); TIGRFAM: ribose 5-phosphate isomerase.
  
    0.612
rpl44e
LSU ribosomal protein L44E; Binds to the 23S rRNA.
       0.594
rps27e
COGs: COG2051 Ribosomal protein S27E; InterPro IPR000592; KEGG: dka:DKAM_0891 30S ribosomal protein S27e; PFAM: Ribosomal protein S27E; SPTR: 30S ribosomal protein S27e; PFAM: Ribosomal protein S27.
       0.594
ADV65232.1
KEGG: bmy:Bm1_27875 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.450
ADV65237.1
HTH DNA binding domain protein; COGs: COG5625 transcription regulator containing HTH domain; KEGG: tag:Tagg_0750 HTH DNA binding domain-containing protein; SPTR: HTH DNA binding domain protein.
       0.450
ADV64462.1
Isochorismatase hydrolase; COGs: COG1335 Amidase related to nicotinamidase; InterPro IPR003881: IPR000868; KEGG: dka:DKAM_1450 isochorismatase hydrolase; PFAM: isochorismatase hydrolase; SPTR: Isochorismatase hydrolase; PFAM: Isochorismatase family.
  
    0.436
ADV64954.1
PhoU family protein; COGs: COG3273 conserved hypothetical protein; InterPro IPR008170; KEGG: dka:DKAM_0263 TrkA-C domain protein; PFAM: PhoU family protein; SPTR: TrkA-C domain protein.
  
     0.425
Your Current Organism:
Desulfurococcus mucosus
NCBI taxonomy Id: 765177
Other names: D. mucosus DSM 2162, Desulfurococcus mucosus DSM 2162, Desulfurococcus mucosus JCM 9187, Desulfurococcus mucosus str. DSM 2162, Desulfurococcus mucosus strain DSM 2162
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