Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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co-expression
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gene co-occurrence
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rpl7aeLSU ribosomal protein L7AE; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs. (127 aa)    
Predicted Functional Partners:
rps28e
COGs: COG2053 Ribosomal protein S28E/S33; InterPro IPR000289; KEGG: dka:DKAM_1351 30S ribosomal protein S28e; PFAM: Ribosomal protein S28e; SPTR: 30S ribosomal protein S28e; PFAM: Ribosomal protein S28e; Belongs to the eukaryotic ribosomal protein eS28 family.
 
 0.999
rpl21e
COGs: COG2139 Ribosomal protein L21E; InterPro IPR018259: IPR001147; KEGG: dka:DKAM_1408 50S ribosomal protein L21e; PFAM: Ribosomal protein L21e; SPTR: 50S ribosomal protein L21e; PFAM: Ribosomal protein L21e; Belongs to the eukaryotic ribosomal protein eL21 family.
   
 0.998
rps19e
SSU ribosomal protein S19E; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.
 
 0.998
rpl32e
COGs: COG1717 Ribosomal protein L32E; InterPro IPR018263: IPR001515; KEGG: dka:DKAM_1158 50S ribosomal protein L32e; PFAM: Ribosomal protein L32e; SPTR: 50S ribosomal protein L32e; PFAM: Ribosomal protein L32; Belongs to the eukaryotic ribosomal protein eL32 family.
  
 0.998
rps4e
COGs: COG1471 Ribosomal protein S4E; InterProIPR000289: IPR000876: IPR013843: IPR002942: IPR 013845; KEGG: dka:DKAM_1163 30S ribosomal protein S4e; PFAM: Ribosomal protein S4E, central domain protein; Ribosomal protein S4E domain protein; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: 30S ribosomal protein S4e; PFAM: S4 domain; Ribosomal family S4e; RS4NT (NUC023) domain; Belongs to the eukaryotic ribosomal protein eS4 family.
  
 0.998
rps3
SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.
  
 0.998
rpl3
LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.
  
 0.998
rps24e
COGs: COG2004 Ribosomal protein S24E; InterPro IPR001976: IPR018098; KEGG: dka:DKAM_1342 30S ribosomal protein S24e; PFAM: Ribosomal protein S24e; SPTR: 30S ribosomal protein S24e; PFAM: Ribosomal protein S24e; Belongs to the eukaryotic ribosomal protein eS24 family.
  
 0.998
rps6e
COGs: COG2125 Ribosomal protein S6E (S10); InterPro IPR001377: IPR018282; KEGG: dka:DKAM_1348 30S ribosomal protein S6e; PFAM: Ribosomal protein S6e; SPTR: 30S ribosomal protein S6e; PFAM: Ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family.
  
 0.998
rpl24e
LSU ribosomal protein L24E; Binds to the 23S rRNA.
 
 0.998
Your Current Organism:
Desulfurococcus mucosus
NCBI taxonomy Id: 765177
Other names: D. mucosus DSM 2162, Desulfurococcus mucosus DSM 2162, Desulfurococcus mucosus JCM 9187, Desulfurococcus mucosus str. DSM 2162, Desulfurococcus mucosus strain DSM 2162
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