STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C9XTD5Unplaced genomic scaffold scaffold_200, whole genome shotgun sequence. (212 aa)    
Predicted Functional Partners:
A0A0C9XV16
Unplaced genomic scaffold scaffold_179, whole genome shotgun sequence.
   
 0.972
A0A0D0A6Z1
Unplaced genomic scaffold scaffold_3, whole genome shotgun sequence.
   
 0.967
A0A0C9ZV33
Unplaced genomic scaffold scaffold_20, whole genome shotgun sequence.
   
 0.831
A0A0C9ZV48
Unplaced genomic scaffold scaffold_20, whole genome shotgun sequence.
   
 0.831
A0A0D0A1M9
Unplaced genomic scaffold scaffold_20, whole genome shotgun sequence.
   
 0.831
A0A0C9YVR3
Unplaced genomic scaffold scaffold_130, whole genome shotgun sequence.
   
 0.815
A0A0C9ZTM8
Unplaced genomic scaffold scaffold_6, whole genome shotgun sequence.
   
 0.811
A0A0D0A4E1
Unplaced genomic scaffold scaffold_6, whole genome shotgun sequence; Belongs to the DEAD box helicase family.
   
 0.802
A0A0D0AF18
Unplaced genomic scaffold scaffold_2, whole genome shotgun sequence.
    
 0.798
A0A0C9YS35
Unplaced genomic scaffold scaffold_99, whole genome shotgun sequence.
   
 0.774
Your Current Organism:
Pisolithus microcarpus
NCBI taxonomy Id: 765257
Other names: P. microcarpus 441, Pisolithus microcarpus 441
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