STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C9XVM9Unplaced genomic scaffold scaffold_172, whole genome shotgun sequence. (231 aa)    
Predicted Functional Partners:
A0A0C9Z987
Unplaced genomic scaffold scaffold_172, whole genome shotgun sequence; Belongs to the cytochrome P450 family.
 
      0.765
A0A0D0A1Z9
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.734
A0A0C9ZD61
Unplaced genomic scaffold scaffold_38, whole genome shotgun sequence.
    
 0.593
A0A0C9XFX9
Unplaced genomic scaffold scaffold_584, whole genome shotgun sequence.
    
 0.574
A0A0C9YZ01
Unplaced genomic scaffold scaffold_104, whole genome shotgun sequence.
    
 0.574
A0A0C9YZS8
Unplaced genomic scaffold scaffold_99, whole genome shotgun sequence; Belongs to the sterol desaturase family.
   
 0.556
A0A0C9ZJM2
Unplaced genomic scaffold scaffold_19, whole genome shotgun sequence.
     
 0.554
A0A0C9ZY03
Unplaced genomic scaffold scaffold_31, whole genome shotgun sequence.
     
 0.554
A0A0C9ZZI3
Unplaced genomic scaffold scaffold_26, whole genome shotgun sequence.
   
 0.546
A0A0C9YV02
Unplaced genomic scaffold scaffold_7, whole genome shotgun sequence.
    
 0.514
Your Current Organism:
Pisolithus microcarpus
NCBI taxonomy Id: 765257
Other names: P. microcarpus 441, Pisolithus microcarpus 441
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