STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C9YBF6Unplaced genomic scaffold scaffold_60, whole genome shotgun sequence. (492 aa)    
Predicted Functional Partners:
A0A0C9ZQM3
Unplaced genomic scaffold scaffold_8, whole genome shotgun sequence.
    
 0.759
A0A0C9ZNJ1
Unplaced genomic scaffold scaffold_68, whole genome shotgun sequence.
    
 0.730
A0A0C9Y7P9
Unplaced genomic scaffold scaffold_76, whole genome shotgun sequence.
    
 0.728
A0A0C9YN52
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.704
A0A0D0A6N1
Unplaced genomic scaffold scaffold_3, whole genome shotgun sequence.
    
 0.684
A0A0C9YVV0
Histone H2A; Belongs to the histone H2A family.
    
 0.629
A0A0C9Y4D5
Unplaced genomic scaffold scaffold_99, whole genome shotgun sequence.
   
 0.626
A0A0C9ZF59
Unplaced genomic scaffold scaffold_117, whole genome shotgun sequence.
    
 0.613
A0A0C9Y3M4
Unplaced genomic scaffold scaffold_102, whole genome shotgun sequence.
    
 0.585
A0A0C9ZBJ5
Unplaced genomic scaffold scaffold_17, whole genome shotgun sequence.
    
 0.585
Your Current Organism:
Pisolithus microcarpus
NCBI taxonomy Id: 765257
Other names: P. microcarpus 441, Pisolithus microcarpus 441
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.