STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C9YP21Unplaced genomic scaffold scaffold_437, whole genome shotgun sequence. (386 aa)    
Predicted Functional Partners:
A0A0C9Z8W8
Unplaced genomic scaffold scaffold_22, whole genome shotgun sequence.
   
 0.835
A0A0C9ZZ84
Unplaced genomic scaffold scaffold_27, whole genome shotgun sequence.
   
 0.835
A0A0C9Y5P8
Unplaced genomic scaffold scaffold_89, whole genome shotgun sequence.
    
  0.493
A0A0C9Z2R3
Unplaced genomic scaffold scaffold_165, whole genome shotgun sequence.
    
 0.446
A0A0C9ZTN4
Unplaced genomic scaffold scaffold_6, whole genome shotgun sequence.
    
  0.435
A0A0C9YXU5
Unplaced genomic scaffold scaffold_4, whole genome shotgun sequence.
  
 
   0.433
A0A0C9ZWT1
Unplaced genomic scaffold scaffold_2, whole genome shotgun sequence.
    
  0.431
A0A0C9ZPB0
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
    
 0.410
A0A0C9ZLW5
Unplaced genomic scaffold scaffold_2, whole genome shotgun sequence.
    
  0.409
A0A0C9YZL9
Unplaced genomic scaffold scaffold_2, whole genome shotgun sequence; Belongs to the 14-3-3 family.
   
 0.407
Your Current Organism:
Pisolithus microcarpus
NCBI taxonomy Id: 765257
Other names: P. microcarpus 441, Pisolithus microcarpus 441
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.