STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C9YQH0Unplaced genomic scaffold scaffold_185, whole genome shotgun sequence. (338 aa)    
Predicted Functional Partners:
A0A0C9YCA1
Unplaced genomic scaffold scaffold_257, whole genome shotgun sequence; Belongs to the adaptor complexes medium subunit family.
    
  0.696
A0A0C9Y5P8
Unplaced genomic scaffold scaffold_89, whole genome shotgun sequence.
    
  0.602
A0A0D0A094
Unplaced genomic scaffold scaffold_10, whole genome shotgun sequence.
   
 0.580
A0A0C9ZVY6
Unplaced genomic scaffold scaffold_38, whole genome shotgun sequence; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.564
A0A0C9ZZD6
Unplaced genomic scaffold scaffold_11, whole genome shotgun sequence.
    
 0.556
A0A0C9YSR4
Unplaced genomic scaffold scaffold_10, whole genome shotgun sequence.
    
 0.550
A0A0C9YZ94
Serine/threonine-protein kinase.
    
 0.544
A0A0C9ZX57
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
  0.534
A0A0C9ZVH4
Unplaced genomic scaffold scaffold_40, whole genome shotgun sequence.
    
  0.519
A0A0C9ZXP2
Unplaced genomic scaffold scaffold_2, whole genome shotgun sequence.
    
 0.517
Your Current Organism:
Pisolithus microcarpus
NCBI taxonomy Id: 765257
Other names: P. microcarpus 441, Pisolithus microcarpus 441
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