A0A0C9YQW0 protein (Pisolithus microcarpus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A0C9YQW0

Unplaced genomic scaffold scaffold_367, whole genome shotgun sequence. (82 aa)

Predicted Functional Partners:

A0A0C9YZG0

0.871

A0A0C9YNB9

0.656

A0A0C9ZCB3

0.656

A0A0C9ZRR6

0.618

A0A0D0AAA1

0.618

A0A0C9ZZD6

0.556

A0A0C9Y5P8

0.555

A0A0C9YSR4

0.550

A0A0C9ZXP2

0.517

A0A0D0AFD1

0.517

Your Current Organism:

Pisolithus microcarpus

NCBI taxonomy Id: 765257
Other names: P. microcarpus 441, Pisolithus microcarpus 441

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0C9Y5P8	A0A0C9YQW0	Unplaced genomic scaffold scaffold_89, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_367, whole genome shotgun sequence.	0.555
A0A0C9Y5P8	A0A0C9YSR4	Unplaced genomic scaffold scaffold_89, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_10, whole genome shotgun sequence.	0.752
A0A0C9Y5P8	A0A0C9ZXP2	Unplaced genomic scaffold scaffold_89, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_2, whole genome shotgun sequence.	0.734
A0A0C9Y5P8	A0A0C9ZZD6	Unplaced genomic scaffold scaffold_89, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_11, whole genome shotgun sequence.	0.997
A0A0C9Y5P8	A0A0D0AFD1	Unplaced genomic scaffold scaffold_89, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_2, whole genome shotgun sequence.	0.734
A0A0C9YNB9	A0A0C9YQW0	Unplaced genomic scaffold scaffold_17, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_367, whole genome shotgun sequence.	0.656
A0A0C9YQW0	A0A0C9Y5P8	Unplaced genomic scaffold scaffold_367, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_89, whole genome shotgun sequence.	0.555
A0A0C9YQW0	A0A0C9YNB9	Unplaced genomic scaffold scaffold_367, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_17, whole genome shotgun sequence.	0.656
A0A0C9YQW0	A0A0C9YSR4	Unplaced genomic scaffold scaffold_367, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_10, whole genome shotgun sequence.	0.550
A0A0C9YQW0	A0A0C9YZG0	Unplaced genomic scaffold scaffold_367, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_2, whole genome shotgun sequence.	0.871
A0A0C9YQW0	A0A0C9ZCB3	Unplaced genomic scaffold scaffold_367, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_41, whole genome shotgun sequence.	0.656
A0A0C9YQW0	A0A0C9ZRR6	Unplaced genomic scaffold scaffold_367, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_7, whole genome shotgun sequence.	0.618
A0A0C9YQW0	A0A0C9ZXP2	Unplaced genomic scaffold scaffold_367, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_2, whole genome shotgun sequence.	0.517
A0A0C9YQW0	A0A0C9ZZD6	Unplaced genomic scaffold scaffold_367, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_11, whole genome shotgun sequence.	0.556
A0A0C9YQW0	A0A0D0AAA1	Unplaced genomic scaffold scaffold_367, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_7, whole genome shotgun sequence.	0.618
A0A0C9YQW0	A0A0D0AFD1	Unplaced genomic scaffold scaffold_367, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_2, whole genome shotgun sequence.	0.517
A0A0C9YSR4	A0A0C9Y5P8	Unplaced genomic scaffold scaffold_10, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_89, whole genome shotgun sequence.	0.752
A0A0C9YSR4	A0A0C9YQW0	Unplaced genomic scaffold scaffold_10, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_367, whole genome shotgun sequence.	0.550
A0A0C9YSR4	A0A0C9YZG0	Unplaced genomic scaffold scaffold_10, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_2, whole genome shotgun sequence.	0.717
A0A0C9YSR4	A0A0C9ZXP2	Unplaced genomic scaffold scaffold_10, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_2, whole genome shotgun sequence.	0.688