STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C9YSS6Unplaced genomic scaffold scaffold_316, whole genome shotgun sequence. (132 aa)    
Predicted Functional Partners:
A0A0C9ZUZ5
Unplaced genomic scaffold scaffold_20, whole genome shotgun sequence.
   
 0.893
A0A0C9ZPS5
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.
  
 0.860
A0A0C9ZNR7
Unplaced genomic scaffold scaffold_37, whole genome shotgun sequence; Belongs to the MRE11/RAD32 family.
  
 0.845
A0A0D0AAW7
Unplaced genomic scaffold scaffold_6, whole genome shotgun sequence; Belongs to the PI3/PI4-kinase family.
   
 0.844
A0A0C9Z080
Unplaced genomic scaffold scaffold_96, whole genome shotgun sequence.
   
 0.842
A0A0C9YRN8
Unplaced genomic scaffold scaffold_102, whole genome shotgun sequence.
   
 0.825
A0A0D0A0M7
Unplaced genomic scaffold scaffold_10, whole genome shotgun sequence.
  
 0.818
A0A0C9YKQ8
Unplaced genomic scaffold scaffold_23, whole genome shotgun sequence.
   
 0.811
A0A0D0A0G7
Unplaced genomic scaffold scaffold_23, whole genome shotgun sequence.
   
 0.811
A0A0C9ZYT3
Unplaced genomic scaffold scaffold_28, whole genome shotgun sequence.
    
 0.805
Your Current Organism:
Pisolithus microcarpus
NCBI taxonomy Id: 765257
Other names: P. microcarpus 441, Pisolithus microcarpus 441
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.