STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C9Z236Unplaced genomic scaffold scaffold_273, whole genome shotgun sequence. (162 aa)    
Predicted Functional Partners:
A0A0D0A7F3
Unplaced genomic scaffold scaffold_2, whole genome shotgun sequence.
  
 0.993
A0A0C9YSA2
Tyrosine--tRNA ligase.
  
  
 0.814
A0A0C9ZEG0
25S rRNA adenine-N(1) methyltransferase; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of an adenine present in helix 65 in 25S rRNA; Belongs to the BMT2 family.
  
  
 0.673
A0A0C9YVR9
Unplaced genomic scaffold scaffold_130, whole genome shotgun sequence.
  
 0.664
A0A0C9Y9N4
Unplaced genomic scaffold scaffold_68, whole genome shotgun sequence; Belongs to the universal ribosomal protein uL16 family.
  
 
 0.645
A0A0C9YLN3
Unplaced genomic scaffold scaffold_140, whole genome shotgun sequence.
  
 
 0.645
A0A0C9Z568
Unplaced genomic scaffold scaffold_140, whole genome shotgun sequence.
  
 
 0.645
A0A0C9ZYY1
Unplaced genomic scaffold scaffold_1, whole genome shotgun sequence.
   
 
 0.632
A0A0C9YYC8
Unplaced genomic scaffold scaffold_3, whole genome shotgun sequence.
   
 
 0.584
A0A0D0A528
Unplaced genomic scaffold scaffold_5, whole genome shotgun sequence.
   
 
 0.584
Your Current Organism:
Pisolithus microcarpus
NCBI taxonomy Id: 765257
Other names: P. microcarpus 441, Pisolithus microcarpus 441
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.