STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C9Z763Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (313 aa)    
Predicted Functional Partners:
A0A0C9YEN2
Unplaced genomic scaffold scaffold_43, whole genome shotgun sequence.
   
 
 0.997
A0A0C9ZMB0
Unplaced genomic scaffold scaffold_41, whole genome shotgun sequence.
   
 
 0.991
A0A0C9ZZ70
Unplaced genomic scaffold scaffold_27, whole genome shotgun sequence.
   
 
 0.991
A0A0C9YR70
Unplaced genomic scaffold scaffold_12, whole genome shotgun sequence.
   
   0.988
A0A0C9ZYI0
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.988
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.986
A0A0C9XR18
Unplaced genomic scaffold scaffold_241, whole genome shotgun sequence.
   
 
 0.980
A0A0C9YVI4
Unplaced genomic scaffold scaffold_75, whole genome shotgun sequence.
   
 
 0.980
A0A0C9ZJ94
Unplaced genomic scaffold scaffold_54, whole genome shotgun sequence.
   
 
 0.978
A0A0C9YZD1
Unplaced genomic scaffold scaffold_102, whole genome shotgun sequence.
   
 
 0.977
Your Current Organism:
Pisolithus microcarpus
NCBI taxonomy Id: 765257
Other names: P. microcarpus 441, Pisolithus microcarpus 441
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