STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C9ZL24Unplaced genomic scaffold scaffold_47, whole genome shotgun sequence. (657 aa)    
Predicted Functional Partners:
A0A0C9Z8W8
Unplaced genomic scaffold scaffold_22, whole genome shotgun sequence.
   
 0.835
A0A0C9ZZ84
Unplaced genomic scaffold scaffold_27, whole genome shotgun sequence.
   
 0.835
A0A0C9XDS0
Unplaced genomic scaffold scaffold_1024, whole genome shotgun sequence.
  
 
   0.557
A0A0D0AC90
Unplaced genomic scaffold scaffold_5, whole genome shotgun sequence.
  
 
   0.544
A0A0C9YAZ4
Unplaced genomic scaffold scaffold_278, whole genome shotgun sequence.
  
 
   0.543
A0A0C9ZLG6
Unplaced genomic scaffold scaffold_44, whole genome shotgun sequence.
  
 
   0.541
A0A0C9Z483
Unplaced genomic scaffold scaffold_150, whole genome shotgun sequence.
  
 
   0.540
A0A0C9YWL0
Unplaced genomic scaffold scaffold_70, whole genome shotgun sequence.
  
 
   0.522
A0A0C9ZXK0
Unplaced genomic scaffold scaffold_15, whole genome shotgun sequence.
  
 
   0.521
A0A0C9XRD7
Unplaced genomic scaffold scaffold_236, whole genome shotgun sequence.
  
 
   0.520
Your Current Organism:
Pisolithus microcarpus
NCBI taxonomy Id: 765257
Other names: P. microcarpus 441, Pisolithus microcarpus 441
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