STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C9ZN12Unplaced genomic scaffold scaffold_39, whole genome shotgun sequence. (333 aa)    
Predicted Functional Partners:
A0A0C9YVA4
Unplaced genomic scaffold scaffold_7, whole genome shotgun sequence.
    
 0.646
A0A0C9YW79
Unplaced genomic scaffold scaffold_126, whole genome shotgun sequence; Belongs to the peptidase C19 family.
    
  0.547
A0A0C9YSD4
Unplaced genomic scaffold scaffold_10, whole genome shotgun sequence.
   
 0.543
A0A0C9YCA1
Unplaced genomic scaffold scaffold_257, whole genome shotgun sequence; Belongs to the adaptor complexes medium subunit family.
    
  0.515
A0A0C9ZL35
Unplaced genomic scaffold scaffold_3, whole genome shotgun sequence.
    
 0.510
A0A0C9ZM76
Proteasome subunit beta.
   
 0.506
A0A0C9Z4S0
Unplaced genomic scaffold scaffold_70, whole genome shotgun sequence.
  
     0.505
A0A0C9YHK1
Unplaced genomic scaffold scaffold_318, whole genome shotgun sequence; Belongs to the heat shock protein 70 family.
   
  0.501
A0A0C9Y5Z1
Unplaced genomic scaffold scaffold_87, whole genome shotgun sequence.
    
 0.496
A0A0C9YVL1
Unplaced genomic scaffold scaffold_6, whole genome shotgun sequence.
   
 
  0.486
Your Current Organism:
Pisolithus microcarpus
NCBI taxonomy Id: 765257
Other names: P. microcarpus 441, Pisolithus microcarpus 441
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