STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C9ZNT4Tyrosine--tRNA ligase. (475 aa)    
Predicted Functional Partners:
A0A0C9YSA2
Tyrosine--tRNA ligase.
  
 0.963
A0A0C9ZF61
Unplaced genomic scaffold scaffold_31, whole genome shotgun sequence; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.834
A0A0D0AAJ4
Unplaced genomic scaffold scaffold_7, whole genome shotgun sequence; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.834
A0A0C9YLD2
Unplaced genomic scaffold scaffold_245, whole genome shotgun sequence; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.824
A0A0C9YQN2
Unplaced genomic scaffold scaffold_12, whole genome shotgun sequence.
  
 0.808
A0A0C9ZCN2
Unplaced genomic scaffold scaffold_39, whole genome shotgun sequence.
  
 
 0.773
A0A0D0A7F3
Unplaced genomic scaffold scaffold_2, whole genome shotgun sequence.
  
  
 0.738
A0A0C9YHC9
Unplaced genomic scaffold scaffold_32, whole genome shotgun sequence; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.731
A0A0C9ZCR9
Unplaced genomic scaffold scaffold_14, whole genome shotgun sequence; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.731
A0A0C9YS57
Unplaced genomic scaffold scaffold_99, whole genome shotgun sequence; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.730
Your Current Organism:
Pisolithus microcarpus
NCBI taxonomy Id: 765257
Other names: P. microcarpus 441, Pisolithus microcarpus 441
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.