STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C9ZP79Unplaced genomic scaffold scaffold_66, whole genome shotgun sequence. (400 aa)    
Predicted Functional Partners:
A0A0C9Y7P9
Unplaced genomic scaffold scaffold_76, whole genome shotgun sequence.
    
 0.681
A0A0C9ZNJ1
Unplaced genomic scaffold scaffold_68, whole genome shotgun sequence.
    
 0.680
A0A0C9ZCR8
Unplaced genomic scaffold scaffold_14, whole genome shotgun sequence.
    
 0.625
A0A0C9YN52
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
  0.595
A0A0C9YVV0
Histone H2A; Belongs to the histone H2A family.
   
 0.590
A0A0C9ZU58
Unplaced genomic scaffold scaffold_5, whole genome shotgun sequence.
    
 0.582
A0A0D0ABS8
Unplaced genomic scaffold scaffold_5, whole genome shotgun sequence.
    
 0.582
A0A0C9YQS2
Unplaced genomic scaffold scaffold_110, whole genome shotgun sequence.
   
 0.553
A0A0C9YW12
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.553
A0A0C9ZJS1
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.553
Your Current Organism:
Pisolithus microcarpus
NCBI taxonomy Id: 765257
Other names: P. microcarpus 441, Pisolithus microcarpus 441
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.