STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C9ZQ21Unplaced genomic scaffold scaffold_9, whole genome shotgun sequence. (55 aa)    
Predicted Functional Partners:
A0A0C9ZVH4
Unplaced genomic scaffold scaffold_40, whole genome shotgun sequence.
   
 0.822
A0A0C9ZVV4
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
   
 0.737
A0A0D0A781
Unplaced genomic scaffold scaffold_3, whole genome shotgun sequence.
    
 0.734
A0A0C9Y0S0
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
    
 0.710
A0A0C9Z132
Unplaced genomic scaffold scaffold_1, whole genome shotgun sequence.
   
 0.706
A0A0C9YZN8
Spindle pole body component.
    
 
 0.698
A0A0C9ZJU5
Spindle pole body component.
    
 
 0.698
A0A0C9ZPX4
Unplaced genomic scaffold scaffold_1, whole genome shotgun sequence; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.693
A0A0C9YZ94
Serine/threonine-protein kinase.
   
 0.661
A0A0D0A0R0
Unplaced genomic scaffold scaffold_10, whole genome shotgun sequence.
    
 
 0.652
Your Current Organism:
Pisolithus microcarpus
NCBI taxonomy Id: 765257
Other names: P. microcarpus 441, Pisolithus microcarpus 441
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.