STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C9ZVI9Unplaced genomic scaffold scaffold_4, whole genome shotgun sequence. (244 aa)    
Predicted Functional Partners:
A0A0C9ZNV6
Unplaced genomic scaffold scaffold_1, whole genome shotgun sequence.
    
 0.798
A0A0C9ZZH8
Unplaced genomic scaffold scaffold_26, whole genome shotgun sequence.
    
 0.798
A0A0C9YRF6
Unplaced genomic scaffold scaffold_11, whole genome shotgun sequence.
    
   0.795
A0A0C9YYD5
Unplaced genomic scaffold scaffold_3, whole genome shotgun sequence.
    
 0.683
A0A0C9YJH7
Unplaced genomic scaffold scaffold_27, whole genome shotgun sequence.
    
 0.513
A0A0C9Y9A3
Unplaced genomic scaffold scaffold_880, whole genome shotgun sequence.
    
 0.478
A0A0C9YWK3
Unplaced genomic scaffold scaffold_251, whole genome shotgun sequence.
    
 0.478
A0A0C9ZEE9
Unplaced genomic scaffold scaffold_124, whole genome shotgun sequence.
    
 0.478
A0A0D0A5C9
Unplaced genomic scaffold scaffold_13, whole genome shotgun sequence.
    
 0.478
A0A0C9XWT5
Unplaced genomic scaffold scaffold_159, whole genome shotgun sequence.
    
 
 0.469
Your Current Organism:
Pisolithus microcarpus
NCBI taxonomy Id: 765257
Other names: P. microcarpus 441, Pisolithus microcarpus 441
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