STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0AGI1Unplaced genomic scaffold scaffold_1, whole genome shotgun sequence. (379 aa)    
Predicted Functional Partners:
A0A0C9YYE8
Unplaced genomic scaffold scaffold_111, whole genome shotgun sequence.
  
  
 
0.866
A0A0C9YSF5
Unplaced genomic scaffold scaffold_10, whole genome shotgun sequence.
    
   0.673
A0A0C9YZY5
Unplaced genomic scaffold scaffold_56, whole genome shotgun sequence.
    
   0.673
A0A0C9ZBW5
Unplaced genomic scaffold scaffold_16, whole genome shotgun sequence.
    
   0.482
A0A0C9ZTG8
Unplaced genomic scaffold scaffold_6, whole genome shotgun sequence.
    
 
 0.410
Your Current Organism:
Pisolithus microcarpus
NCBI taxonomy Id: 765257
Other names: P. microcarpus 441, Pisolithus microcarpus 441
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